Idiopathic short stature: characteristics of polymorphism of the Taql gene of vitamin D receptor

Authors

DOI:

https://doi.org/10.15574/SP.2023.136.14

Keywords:

vitamin D, vitamin D receptor gene, children, idiopathic short stature, growth hormone, vitamin D receptor polymorphic locus rs731236 Tagl

Abstract

The causes of idiopathic short stature (IS) are diverse and not well understood, including polymorphisms of the vitamin D receptor (VDR) gene, dysfunction of growth hormone (GH) secretion, or certain structural abnormalities of the GH cannot be denied.

The Taql polymorphism is located at the exon-intron junction and can potentially affect the stability of the VDR gene mRNA and, consequently, the child's height.

Purpose - to study of the influence of the Taql polymorphism of the VDR gene in children with IS on certain indicators of bone metabolism.

Materials and methods. We studied 22 children aged 10.68±3.28 years diagnosed with idiopathic short stature. The following data were taken into account: sex and age of the patient, anthropometric data, blood vitamin D level, bone age, basal and after stimulation tests, and Taql polymorphism of the VDR gene. All data were analyzed by non-parametric methods of variational statistics using the computer program MedCals (2006).

Results. All children with IS had low vitamin D levels, regardless of the Taql polymorphic locus of the vitamin D receptor gene. All children with IS, regardless of the Taql polymorphic locus of the vitamin D receptor gene, were found to have low vitamin D levels. The basal level of GH in all patients was low, while the stimulated level of GH was normal in all patients.

Conclusions. In the group of patients with IS, the frequency of the T/C (TaqI T/C, g.65058 T>C) genotype is 1.63 times higher than in the group of healthy subjects. Carriage of allele C of the polymorphic locus rs731236 Tagl of the VDR gene is significantly associated with the risk of developing idiopathic short stature - OR (Odds ratio) =1.68 (95% CI (confidence interval): 1.41-2.01; p<0.001), and in the presence of the T/C genotype the risk of this pathology is significantly high - OR=3.78 (95% CI: 1.23-11.63; p<0.02). Vitamin D deficiency was found in children with the T/T polymorphism, and vitamin D deficiency was found in patients with the T/C and C/C polymorphisms.

The research was carried out in accordance with the principles of the Helsinki Declaration. The study protocol was approved by the Local Ethics Committee of the participating institution. The informed consent of the patient was obtained for conducting the studies.

No conflict of interests was declared by the authors.

References

Alathari BE, Sabta AA, Kalpana CA, Vimaleswaran KS. (2020). Vitamin D pathway-related gene polymorphisms and their association with metabolic diseases: A literature review. J Diabetes Metab Disord. 19 (2): 1701-1729. https://doi.org/10.1007/s40200-020-00561-w; PMid:33553043 PMCid:PMC7843833

Autier P, Boniol M, Pizot C, Mullie P. (2014). Vitamin D status and ill health: a systematic review. Lancet Diabetes Endocrinol. 2 (1): 76-89. https://doi.org/10.1016/S2213-8587(13)70165-7; PMid:24622671

Choi SK, Park MS, Song JK, Yoon KS, Yoon KL, Shim KS. (2013). Association of polymorphisms in the vitamin D receptor promoter with idiopathic short stature. J Korean Med Sci. 28 (9): 1329-1333. https://doi.org/10.3346/jkms.2013.28.9.1329; PMid:24015038 PMCid:PMC3763107

Contreras-Bolívar V, García-Fontana B, García-Fontana C, Muñoz-Torres M. (2021). Mechanisms Involved in the Relationship between Vitamin D and Insulin Resistance: Impact on Clinical Practice. Nutrients. 13 (10): 3491. https://doi.org/10.3390/nu13103491; PMid:34684492 PMCid:PMC8539968

Dilworth FJ, Chambon P. (2001). Nuclear receptors coordinate the activities of chromatin remodeling complexes and coactivators to facilitate initiation of transcription. Oncogene. 20 (24): 3047-3054. https://doi.org/10.1038/sj.onc.1204329; PMid:11420720

Emmanouilidou E, Galli-Tsinopoulou A, Kyrgios I, Gbandi E, Goulas A. (2015). Common VDR polymorphisms and idiopathic short stature in children from northern Greece. Hippokratia. 19 (1): 25-29.

Fronczek M, Osadnik T, Banach M. (2023). Impact of vitamin D receptor polymorphisms in selected metabolic disorders. Curr Opin Clin Nutr Metab Care. 26 (4): 316-322. https://doi.org/10.1097/MCO.0000000000000945; PMid:37144463 PMCid:PMC10256311

Hussain T, Naushad SM, Ahmed A, Alamery S, Mohammed AA, Abdelkader MO, Alkhrm NAN. (2019). Association of vitamin D receptor TaqI and ApaI genetic polymorphisms with nephrolithiasis and end stage renal disease: a meta-analysis. BMC Med Genet. 20 (1): 193. https://doi.org/10.1186/s12881-019-0932-6; PMid:31822280 PMCid:PMC6902508

Jehan F, Voloc A, Esterle L, Walrant-Debray O, Nguyen TM, Garabedian M. (2010). Growth, calcium status and vitamin D receptor (VDR) promoter genotype in European children with normal or low calcium intake. J Steroid Biochem Mol Biol. 121 (1-2): 117-120. https://doi.org/10.1016/j.jsbmb.2010.03.088; PMid:20398755

Jorde R, Svartberg J, Joakimsen RM, Grimnes G. (2012). Associations between polymorphisms related to calcium metabolism and human height: the Tromsø Study. Ann Hum Genet. 76 (3): 200-210. https://doi.org/10.1111/j.1469-1809.2012.00703.x; PMid:22390397

Khattab Y, Reda R, El-Gaafary, M, Zeitoun Y, Abo-Shady R, Abdelhady W. (2022). BsmI gene polymorphism of vitamin D receptor in obese Egyptian male medical students and its relationship with vitamin D deficiency. Egypt J Med Hum Genet. 23: 56. https://doi.org/10.1186/s43042-022-00275-z

Nosratabadi R, Arababadi MK, Salehabad VA, Shamsizadeh A, Mahmoodi M, Sayadi AR, Kennedy D. (2010). Polymorphisms within exon 9 but not intron 8 of the vitamin D receptor are associated with the nephropathic complication of type-2 diabetes. Int J Immunogenet. 37 (6): 493-497. https://doi.org/10.1111/j.1744-313X.2010.00953.x; PMid:20727043

Osman E, Al Anouti F, El Ghazali G, Haq A, Mirgani R, Al Safar H. (2015). Frequency of rs731236 (Taql), rs2228570 (Fok1) of Vitamin-D Receptor (VDR) gene in Emirati healthy population. Meta Gene. 6: 49-52. https://doi.org/10.1016/j.mgene.2015.09.001; PMid:26504744 PMCid:PMC4576359

Rajakumar K, de las Heras J, Chen TC, Lee S, Holick MF, Arslanian SA. (2011). Vitamin D status, adiposity, and lipids in black American and Caucasian children. J Clin Endocrinol Metab. 96 (5): 1560-1567. https://doi.org/10.1210/jc.2010-2388; PMid:21367931 PMCid:PMC3085205

Santos BR, Mascarenhas LP, Satler F, Boguszewski MC, Spritzer PM. (2012). Vitamin D deficiency in girls from South Brazil: a cross-sectional study on prevalence and association with vitamin D receptor gene variants. BMC Pediatr. 12: 62. https://doi.org/10.1186/1471-2431-12-62; PMid:22681928 PMCid:PMC3464685

Wang W, Luo XP, Cai LX, Cui ZR, Luo XY, Luo RK. (2015). Relationship between vitamin D receptor (VDR) polymorphisms and the efficacy of recombinant human growth hormone (rhGH) treatment in children with idiopathic short stature. Genet Mol Res. 14 (3): 10507-10514. https://doi.org/10.4238/2015.September.8.12; PMid:26400282

Published

2023-12-28

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Section

Original articles